BETRAN LAB

Evolutionary Biology

Links

DROSOPHILA

The Drosophila Genome Project
The Berkeley Genome Pipeline is a suite of tools and Web sites for aligning and subsequently browsing and working with whole genome comparisons. D. melanogaster & D. pseudoobscura
BBC NEWS: Fruit Fly gene success
Berkeley Drosophila Genome Project
Dosage Compensation in Drosophila
Drosophila Polymorphism Database (DPDB) is a Web platform containing primary and secondary nucleotide information of the Drosophila genus for using in DNA diversity studies.
Drosophila Population Genomic Project (DPGP) Sequencing of the Drosophila simulans and D. yakuba genomes.
Drosophila Resources
Exelixis Drosophila Stock Collection at Harvard School of Medicine
European Drosophila Genome Project (EDGP)
FlyBase FlyBase is a comprehensive database for information on the genetics and molecular biology of Drosophila. It includes data from the Drosophila Genome Projects and data curated from the literature. FlyBase is a joint project with the Berkeley and European Drosophila Genome Projects.
Flybrain An Online Database of the Drosophila Nervous System.
FlyTrap is an online database of gene expression patterns (of P[Gal4] lines) in the fly brain.
FlyView Drosophila image database.
GEM Website Scans of Bridges' original 1935 polytene drawings for D. melanogaster, modified from King (Handbook of Genetics, Volume 3 - Invertebrates of Genetic Interest, Plenum Press, New York, 1975)
GeNet / SegNet The Gene Networks Database has extensive information on interaction between segmentation genes.
Interactive Fly A cyberspace guide to Drosophila genes and their roles in development.
Mutant Fruit Flies
P-Screen Database This is the public gateway to the ongoing P-element Screen / Gene Disruption Project of the Bellen/Hoskins/Rubin/Spradling labs.
TaxoDros The database on Taxonomy of Drosophilidae
TIGR Drosophila gene index is a collection of known and predicted gene sequences from EST, cDNA and genomic data.
Vista Browser is a comprehensive suite of programs and databases for comparative analysis of genomic sequences.
Web Directory: Drosophila Virtual Library This directory points to internet resources for research on the fruit fly Drosophila melanogaster.
Zoom the Fruit Fly

Additional Resources
Genome Sequencing Whitepaper Proposals:
Drosophila simulans and D. yakuba (Submitted Feb. 2003)
Drosophila ananassaae, D. erecta, D. grimshawi, D. mojavensis, D. persimilis, D. sechellia, D. virilis, and D. willistoni (Submitted June 2003)

Sequence and Assembly

Individual Sequence Reads:
NCBI Trace Archive
D. ananassae
D. erecta
D. grimshawi
D. melanogaster
D. mojavensis
D. persimilis
D. pseudoobscura
D. sechellia
D. simulans
D. virilis
D. willistoni
D. yakuba
Ensembl Trace Server

D. melanogaster Sequence Assembly

NCBI
Ensembl
Baylor


Data Classes Selected Searches & Tools
Maps Annotated Genome: GBrowse & Apollo views
CytoSearch
Genes Search Genes,   Alleles,   Gene Products,
Protein Function, Location, Process, Structure (GO),
Gene Expression
Genome Annotation & Sequences Search Annotations, BLAST, EST & DGC cDNAs
Genome Sequence Download
Stocks Search & order Stocks
Stock Centers' homepages: Bloomington, Kyoto, Ehime, Szeged, San Diego , & Special Collections
Clones from DGRC, BDGP, BACPAC and MRC
Transgenes &
Transposons
Search Transgene Constructs or Insertions
Browse Natural Transposons
Aberrations Search Aberrations
Anatomy & Images Anatomy Images Browser and Terms
References Search literature References
People Search addresses, Update or Add your address

Institutional Links


Links